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SAMUEL DAVID PERLI

Dissecting & Engineering Biology

I am a postdoctoral fellow working with Prof. Shinya Yamanaka at Gladstone Institutes and UCSF on developing computational and molecular tools for dissecting and engineering Biology as well as developing next generation applications of pluripotent stem cells. I have previously worked with Prof. Timothy Lu @ MIT, where I obtained my PhD. Prior to that, I earned a MS in Computer Science from MIT working with Prof. Dina Katabi as a Presidential Fellow. I finished my Bachelor's in Electrical Engineering @ IIT Madras and was awarded an Institute medal for the best academic record in the department.

 

All of Biology is dictated by the fundamentally digital information encoded within nucleic acids. Having been extensively trained as a Computer Scientist and a Molecular Biologist, I aspire to integrate computational and molecular approaches towards building tools for dissecting and engineering biological systems

 

PUBLICATIONS

Samuel D. Perli, Cheryl H. Cui and Timothy K. Lu

Science, 2016

Alan S L Wong, Gigi C G Choi, Cheryl H Cui, Gabriela Pregernig, Pamela Milani, Miriam Adam, Samuel D Perli, Samuel W Kazer, Aleth Gaillard, Mario Hermann, Alex K Shalek, Ernest Fraenkel, Timothy K Lu

Proceedings of the National Academy of Sciences, U.S.A, 2016

Kevin C. Ma, Samuel D. Perli and Timothy K. Lu

Journal of Molecular Biology, 2016

Samuel D. Perli and Timothy K. Lu

ACM NanoCom, 2016

Lior Nissim*, Samuel D. Perli*, Alexandra Fridkin, Pablo Perez-Pinera, and Timothy K. Lu

Molecular Cell, May 2014

Featured as the Cover article

Fahim Farzadfard, Samuel D. Perli, and Timothy K. Lu
ACS Synthetic Biology, August 2013

Kristjan E. Kaseniit, Samuel D. Perli and Timothy K. Lu

Proc. of the IEEE Biomedical Circuits and Systems Conference (BioCAS), 2011

Samuel D. Perli, Nabeel Ahmed and Dina katabi
ACM MobiCom, 2010

Samuel D. Perli, Nabeel Ahmed and Dina Katabi
ACM SIGCOMM, 2010
Won the second place in the ACM, Student Research Competition

Shyamnath Gollakota, Samuel D. Perli and Dina Katabi
ACM SIGCOMM, 2009

 

PATENTS

 

SELF-TARGETING GENOME EDITING SYSTEM

Timothy K. Lu, Samuel D. Perli, Cheryl H. Cui.

PCT/US2016/032348 WO 2016/183438

METHODS AND COMPOSITIONS FOR THE PRODUCTION OF GUIDE RNA

Timothy K. Lu, Lior Nissim, Samuel D. Perli

PCT/US2015/024196 WO/2015/153940

METHOD AND SYSTEM FOR CODING INFORMATION ON A ROADWAY SURFACE SUBJECT TO MOTION BLUR

Raymond Yim, Samuel David Perli, Fatih Porikli, Jinyun Zhang

USPTO #8,378,799

 

CONTACT ME

Thank you for visiting my web page. Feel free to get in touch to find out more!

 

Address

1650 Owens St
SF, San Francisco County 94158
USA

Contact